weecology

People

Ben Morris

Currently: Senior Software Engineer at Netflix. Former Weecology Undergrad Software developer

Clayton Bingham

Currently: Postdoc at Case Western Reserve. Former Weecology Undergrad researcher

Dan McGlinn

Currently: Assistant Professor, College of Charleston. Former Weecology Postdoc

David J. Harris

Currently: Lead Data Scientist at Chewy. Former Weecology Postdoc

Elita Baldridge

Currently: Owner, Tanglebriar Nubians. Former Weecology Phd student

Kari Norman

Currently: PhD student, UC Berkeley. Former Weecology Undergraduate researcher

Kate Thibault

Currently: Lead Research Scientist, NEON. Former Weecology Postdoc

Ken Locey

Currently: Data Science Analyst, Rush University Medical Center. Former Weecology PhD student

Mikaelle Giffen

Currently: Data Science Intern, Recursion. Former Weecology Undergrad researcher

Sarah Supp

Currently: Assistant Professor, Denison University. Former Weecology Phd student

Xiao Xiao

Currently: Data Scientist, Intuit. Former Weecology PhD student

Zack Brym

Currently: Assistant Professor, University of Florida. Former Weecology PhD Student/Postdoc

Henry Senyondo

Software Developer

Glenda Yenni

Project Manager

Juniper Simonis

Data Analyst

Hao Ye

Currently: Reproducibility Librarian, University of Florida. Former Weecology Postdoc

Akash Goel

Currently: Software Development Engineer, Amazon Lab126. Former Undergrad Software Developer

Ellen Bledsoe

PhD Student

Erica Christensen

Currently: Postdoc, New Mexico State University. Former Weecology PhD Student

Kristina Riemer

Currently: Scientific Programmer, University of Arizona. Former Weecology PhD Student

Renata Diaz

PhD Student

Sergio Marconi

PhD Student

Shawn Taylor

Currently: postdoc at USDA-ARS. Former Weecology PhD student

Shivam Negi

Currently: Senior Engineer, Samsung R&D. Former Weecology Undergrad Software Developer

Virnaliz Cruz

PhD Student

Andrew Zhang

Currently: software engineer at Instagram. Former Weecology Undergrad software developer

Apoorva Pandey

Currently: Software Engineer with Datapane. Former Weecology Undergrad Software Developer

Harshit Bansal

Currently: Undergrad. Former Weecology Undergrad Software Developer

Pranita Sharma

Currently: Software Engineer, Bloomberg. Former Weecology Undergrad Software Developer

Sumit Saha

Currently: Data Analyst Intern, Squad. Former Weecology Undergrad Software Developer

Projects

Data Retriever

Package manager for data

Ecological Dynamics

How ecosystems change through time

Ecological Forecasting

Like weather forecasting, but for ecology

Macroecology

Large scales and general patterns

Portal Project

Long-term ecological research site

Remote Sensing

Ecological information from remote sensing

Recent Publications

More Publications

. Ten Simple Rules for a Successful Remote Postdoc. PLOS Comp Bio, 2020.

Preprint PDF Project HTML

. A data science challenge for converting airborne remote sensing data into ecological information. PeerJ, 2019.

Project HTML

Software

We build tools to make doing science easier and more efficient by automating the early phases of the data analysis pipeline.

  • Data Retriever: A package manager for data. It downloads, cleans, and stores publicly available data, so analysts spend less time managing data, and more time analyzing it. Available for Python, R, Julia, and the command line.
  • portalr: Quickly download, clean, and work with data from the Portal Project.

Teaching

We are actively involved in training scientists in both ideas and tools.

  • Software and Data Carpentry Workshops
  • University of Florida R Meetup
  • Data Carpentry for Biologists (semester long course)
  • Biodiversity
  • Ecological Dynamics and Forecasting

Contact